MuscleDB is a database containing RNAseq expression levels for mouse muscle tissues.
Explore the database by filtering the data on the toolbar at the left and with different visualizations on the bottom left. Need help getting started? See our help page.
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Summary Statistics

Select two tissues to compare.

Principal Components of Selected Tissues

Zoom on a region by highlighting the graph and double clicking Highlight a point on the graph by clicking a row in the table
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How we built the MuscleDB

MuscleDB is a collaboration between the Hughes Lab and the Esser Lab.

The website was built using Shiny Apps and many R packages including ggplot2, ggvis, data.table, dplyr, and d3heatmap.

All source code for the project is available on Github.

If you notice any problems or any functionality you'd like to have, please post an issue to Github.